The Complete Mitochondrial Genome of Sphaeniscus atilius (Walker, 1849) (Diptera: Tephritidae) and Implication for the Phylogeny of Tephritidae | [Pakistan Journal of Zoology • 2024]

Author(s):

1. Shibao Guo: Xinyang Agriculture and Forestry University,Xinyang 464000,China

2. Junhua Chen: Xinyang Agriculture and Forestry University,Xinyang 464000,China

3. Nan Song: Henan Agriculture University,Zhengzhou 450002,China

4. Fangmei Zhang: Xinyang Agriculture and Forestry University,Xinyang 464000,China

Abstract:

The complete mitochondrial genome of Sphaeniscus atilius was characterized and annotated in this study. The mitogenome was 16,854 bp in length and encoded 37 typical mitochondrial genes, including 13 protein-coding genes, 22 tRNA genes, 2 ribosomal RNA genes, and 1 control regions. The total length of the 13 PCGs was 11,140 bp, and the AT content was 79.8%. There were five types of start codons, ATT (nad2, nad3, nad5, and nad6), ATG (cox2, cox3, atp6, nad4, nad4l, and cob), CGA (cox1), as well as ATC (atp8) and ATA (nad1). Most of the PCGs had typical TAA stop codons, except nad5 which terminated with incomplete forms T-. Ile, Phe, Leu and Asn were the most frequently used amino acids in mitochondrial PCGs. Most tRNA genes could be folded into the typical cloverleaf structure, except trnS1 and trnT which lacked the dihydrouridine (DHU) and T?C arms, respectively. Phylogenetic analyses based on 13 protein-coding genes among the available sequenced species of family Tephritidae by maximum likelihood and bayesian inference methods suggested the genus relationship of Tephritidae: ((Bactrocera, Dacus, Zeugodacus), Felderimyia, Anastrepha), (Acrotaeniostola, (Neoceratitis, Ceratitis), Euleia, Rivellia), (Procecidochares, (Tephritis, Sphaenisscus))))). Our results presented the ifrst mitogenome from Sphaeniscus and provide insights into the species identification, taxonomy and phylogeny of S. atilius.

Page(s): 2929-2942

DOI: 10.17582/journal.pjz/20230912053433

Published: Journal: Pakistan Journal of Zoology, Volume: 56, Issue: 6, Year: 2024

Keywords:

mitochondrial genome , Phylogeny , Tephritidae , Sphaeniscus atilius

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